Query sequences:
>agCNE2_Homo-sapiens-hg19_GRCh37_11-32052624-32053243
GAATAAATTATAGATGAAACCCCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCTGCAGCAAATACTCA
GGCACAAGATAGAAAGCCCTGTAAAACAATGATATATTCTCTGCTTGCAGGCATTGACTAGTGGCCCATTCACTCCCGGTGCTGTTCTTC
AACCACGCTCCCTCCGCTCATGCCCCGTCATTTAAAATCCATTTTAATTTAAAGATGCACAAGGCAGTGCTCGTGGTACATTTACTCATC
CTAGTTATACATCATGGAGCAAGGAAAAGAAAATTGTTTCATCTAGAGATACGGTTCAATGTGGTCACCACTGAACAGTGGAGTAATTAC
CATATCAGACCCACTCAAAATGCACTCAGGGTGTTCTGTGACCTATCATTTGCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAA
TTGCTGACTTAATTAAAACCAAGACCTTTCTGTCATTTAATTACAGGGAGAAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTC
TTAACAGTTATTAACTGCTTCACCATCATTTATTGTTTCAGATTTTTCAATTTGAAAATACTTCCCGTGACAGAAGTAAT

Human SNP in dbSNP:
11:32031078-32031697

# of blast hits:
Callorhinchus-milii_             :1
Rhincodon-typus-N_               :1
Erpetoichthys-calabaricus_       :1
Lepisosteus-oculatus_            :1
Danio-rerio_                     :2
Gasterosteus-aculeatus_          :2
Tetraodon-nigroviridis_          :2
Oryzias-latipes_                 :1
Latimeria-chalumnae_             :1
Microcaecilia-unicolor-N_        :1
Xenopus-tropicalis_              :1
Sphenodon-punctatus_             :1
Podarcis-muralis-N_              :1
Anolis-carolinensis_             :1
Python-bivittatus-N_             :1
Protobothrops-mucrosquamatus-N_  :1
Thamnophis-sirtalis-N_           :1
Pseudonaja-textilis-N_           :1
Notechis-scutatus_               :1
Chelonoidis-abingdonii_          :1
Alligator-mississippiensis-N_    :1
Nothoprocta-perdicaria_          :1
Gallus-gallus_                   :1
Calidris-pugnax_                 :1
Ornithorhynchus-anatinus_        :2
Monodelphis-domestica_           :1
Choloepus-hoffmanni_             :1
Chrysochloris-asiatica-N_        :1
Condylura-cristata-N_            :1
Myotis-lucifugus_                :1
Equus-caballus_                  :1
Bos-taurus_                      :1
Heterocephalus-glaber-male_      :1
Nannospalax-galili_              :1
Mus-musculus_                    :1
Propithecus-coquereli_           :1
Aotus-nancymaae_                 :1
Homo-sapiens_                    :1

Alignment of blast hits:
speciesName_database_chr-start-end_geneName
691
                                                                                        1
Used4treeSearch                                                                         001111111111111111111011111111111111111111111111111111111111111111111111111111111000111111
Callorhinchus-milii_3_KI635862.1-c11068128-11067509_ENSCMIG00000018083_663              GAATAAATTATAGATGAAAAC-TCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCACCGTAAATCTACATTTGACAACAT
Rhincodon-typus-N_v2_NW018079078.1-c30342-29725_NONE_670                                GAATAAATTATAGATGAAAAC-CCATCATATGTTTATAAATACACTAACATTAGCATTTCACTTCACCATAAATCTATACTCGACAACAT
Erpetoichthys-calabaricus_1_2-56438625-56439249_ENSECRG00000004293_735                  GAATAAATTATAGATGAAACG-CCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCTGCACTCAACAACAG
Lepisosteus-oculatus_LepOcu1_LG27-c9547938-9547315_rcn1_767                             GAATAAATTATAGATGAAACA-CCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCAGCACTCAACAACAG
Danio-rerio_GRCz11_25-15072609-15072910_pax6a_346                                       ------------------------------------------------------------------------------------------
Danio-rerio_GRCz11_25-15072251-15072464_pax6a_103                                       --ATGAATTAGAGATGAAACG-CTATTATATGTTTATAAATACTCCAGCATTACAATTTTACTTCCCCATAAATCTGCGGTC--------
Gasterosteus-aculeatus_BROADS1_groupII-c12836068-12835800_rcn1_198                      ------------------------------------------------------------------------------------------
Gasterosteus-aculeatus_BROADS1_groupXIX-1308516-1308623_ENSGACG00000002487_79           ------------------------------------------------------------------------------------------
Tetraodon-nigroviridis_TETRAODON8_5-4275384-4275614_rcn1_180                            ------------------------------------------------------------------------------------------
Tetraodon-nigroviridis_TETRAODON8_Unrandom-21877115-21877223_ENSTNIG00000004771_100     ------------------------------------------------------------------------------------------
Oryzias-latipes_ASM223467v1_3-c23329716-23329447_ENSORLG00000009881_227                 ------------------------------------------------------------------------------------------
Latimeria-chalumnae_LatCha1_JH126652.1-1371187-1371811_rcn1_766                         GAATAAATTATAAATGAAACA-CCATCATATGTTTATAAATACACTAACATTAGCATTTTACTAACCCATAAATCTGTGCTCCACAACAT
Microcaecilia-unicolor-N_aMicUni1-1_NC044034.1-c140723304-140722684_NONE_667            --ATAAGTCAGAGATGAGACCTCCATCATACGTTTATAAATACACTAACAATAGCACATTCCTTCCTCATAAATCTTCACA-AAAAATAT
Xenopus-tropicalis_v91_4-c9759110-9758467_fgf11_421                                     -AATAAATTCTCCATGAAGCCCCCATCATATGTTTATAAATACACCCACATTAGCATTTTAGTCGCTCGTAAATCTG-------------
Sphenodon-punctatus_ASM311381v1_QEPC01008061.1-c692228-691608_ENSSPUG00000004587_914    GAATAAATTATAAATGAAACCCCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCTGCACA---AAACAT
Podarcis-muralis-N_PodMur10_NC041312.1-66434474-66435094_NONE_910                       GAATAAATTATAAATGAAATCCCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCTACACT---AAACAT
Anolis-carolinensis_0_1-60922543-60923163_ENSACAG00000002439_887                        GAATAAATTATAAATGAAATCTCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCTCCCTT---AAACAT
Python-bivittatus-N_502_NW006532569.1-c68387-67767_NONE_869                             GAATAAATTATAAATGAAATCCCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCTACCCT---AAATAT
Protobothrops-mucrosquamatus-N_1-0_NW015388637.1-31923-32543_NONE_860                   GAATAAATTATAAATGAAATCCCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCTACCCT---AAATAT
Thamnophis-sirtalis-N_6-0_NW013657925.1-491476-492100_NONE_844                          GAATAAATTATAAATGAAATCCCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCTACCCT---AAATAT
Pseudonaja-textilis-N_EBS10Xv2-PRI_NW020769309.1-c4502074-4501454_NONE_860              GAATAAATTATAAATGAAATCCCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCTACCCT---AAATAT
Notechis-scutatus_TS10Xv2-PRI_ULFQ01000010.1-15461846-15462466_ENSNSUG00000012105_856   GAATAAATTATAAATGAAATCCCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCTACCCT---AAATAT
Chelonoidis-abingdonii_ASM359739v1_PKMU01004445.1-651872-652492_ENSCABG00000012666_928  GAATAAATTATAGATGAAACCCCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCTGCACC---ACACAT
Alligator-mississippiensis-N_ASM28112v4_NW017713697.1-28608132-28608752_NONE_919        GAATAAATTATAGATGAAACCCCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCTGTACC---AAACAT
Nothoprocta-perdicaria_notPer1_PTEW01000029.1-c3233217-3232597_ENSNPEG00000007456_928   GAATAAATTATAGATGAAACCCCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCTGCACC---AAACAT
Gallus-gallus_GRCg6a_5-5545349-5545969_ENSGALG00000012121_919                           GAATAAATTATAGATGAAACCCCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCTGCACC---AAACAT
Calidris-pugnax_ASM143184v1_KQ482227.1-1593784-1594404_ENSCPUG00000017141_919           GAATAAATTATAGATGAAACCCCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCTGCACC---AAACAT
Ornithorhynchus-anatinus_OANA5_3-18033675-18034294_ENSOANG00000015148_872               -AATAAATTATACATGAAACCTCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCTGCACC---AAACAT
Ornithorhynchus-anatinus_OANA5_Ultra43-c272924-272857_NKD2_54                           ------------------------------------------------------------------------------------------
Monodelphis-domestica_monDom5_5-267742398-267743017_ENSMODG00000009625_895              --ATAAATTCTCGATGAAACCTCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCTGCTCC---AAAGAG
Choloepus-hoffmanni_choHof1_scaffold23039-c3496-2877_NONE_1006                          GAATAAATTATAGATGAAACCTCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCTGCAGC---AAACTC
Chrysochloris-asiatica-N_ChrAsi1-0_NW006408590.1-7597970-7598590_NONE_1027              GAACAAATTATAGATGAAGCCCCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCTGCAGC---CACCAC
Condylura-cristata-N_ConCri1-0_NW004567116.1-c18302962-18302345_NONE_1019               -AATAAATTATAGATGAAACCCCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCCCATAAATCTGCAGC---AAACAC
Myotis-lucifugus_0_GL429859-3839511-3840129_ENSMLUG00000009140_1031                     -AATAAATTATAGATGAAACCCCCATCATATGTTTATAAATACACTAACATTACCATTTTACTTCCTCATAAATCTGCCGC---AAACAC
Equus-caballus_0_7-99998407-99999021_RCN1_956                                           --ATAAATTATAGATGAAACCCCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCGTAAATCTGCAGC---AAACAC
Bos-taurus_2_15-62788984-62789604_RCN1_974                                              -AATAAATTATAGATGAAACCCCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTGCTCATAAATCTGCAGC---AAACAC
Heterocephalus-glaber-male_0_JH173915.1-848248-848867_ENSHGLG00100011830_1011           GAATAAATTGTAGATGAAACCCCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCTGCAGC---AAACAT
Nannospalax-galili_0_KL199188.1-5296444-5297060_Rcn1_1006                               -AATAAATTATAGATGAAACC-CCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCTGCAGC---AAACAC
Mus-musculus_GRCm38_2-c105448179-105447561_Rcn1_1031                                    -AATAAATTATAGATGAAACCCCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCTGCAGC---AAACAT
Propithecus-coquereli_0_KQ022625.1-c4941625-4941006_ENSPCOG00000015851_1042             GAATAAATTATAGATGAAACCCCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTGCTCATAAATCTGCAGC---AAACAC
Aotus-nancymaae_0_KZ197012.1-7301836-7302455_ENSANAG00000027955_1083                    GAATAAATTATAGATGAAACCCCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCTGCAGC---AAATAC
Homo-sapiens_GRCh38_11-32031078-32031697_RCN1_1119                                      GAATAAATTATAGATGAAACCCCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCTGCAGC---AAATAC
YOURSEQ1_agCNE2_Homo-sapiens-hg19_GRCh37_11-32052624-32053243                           GAATAAATTATAGATGAAACCCCCATCATATGTTTATAAATACACTAACATTAGCATTTTACTTCCTCATAAATCTGCAGC---AAATAC

                                                                                        91
Used4treeSearch                                                                         111111111111111111110001111111111111111111111111111100000001111111111111111011111111111100
Callorhinchus-milii_3_KI635862.1-c11068128-11067509_ENSCMIG00000018083_663              TTAAGCACAAGAAATAGAGC---CCTGTAGAACAATGATATATTCCCGTGCT-------GCCAGCCAAGAGTAGT-GGCCCATTCATT--
Rhincodon-typus-N_v2_NW018079078.1-c30342-29725_NONE_670                                TTAAGCACAAGAAATGGAGC---TCTGTAGAACAATGATATATTTTCTCACT-------GGCAGCCAAGAGTAGT-GGCCCATTCATT--
Erpetoichthys-calabaricus_1_2-56438625-56439249_ENSECRG00000004293_735                  TTAAGTGCTGGGAAGAAAGC--CCCCATTGAACAATGATATATTCTCTCCTT-------GCCAGCCATGACTAGT-AGTCCATTCATTT-
Lepisosteus-oculatus_LepOcu1_LG27-c9547938-9547315_rcn1_767                             TTAAGTGCAAGAAATAAATC--TCCCGGAGAACAATGATATATTCTCTTCTC-------GCCAGCCATGACTAGC-GGCCCATTCATTT-
Danio-rerio_GRCz11_25-15072609-15072910_pax6a_346                                       ------------------------------------------------------------------------------------------
Danio-rerio_GRCz11_25-15072251-15072464_pax6a_103                                       ---------AGGCATAAAACCCCCCAGTAGAACAATGATATATTCCCT------------------------------------------
Gasterosteus-aculeatus_BROADS1_groupII-c12836068-12835800_rcn1_198                      ------------------------------------------------------------------------------------------
Gasterosteus-aculeatus_BROADS1_groupXIX-1308516-1308623_ENSGACG00000002487_79           ------------------------------------------------------------------------------------------
Tetraodon-nigroviridis_TETRAODON8_5-4275384-4275614_rcn1_180                            ------------------------------------------------------------------------------------------
Tetraodon-nigroviridis_TETRAODON8_Unrandom-21877115-21877223_ENSTNIG00000004771_100     ------------------------------------------------------------------------------------------
Oryzias-latipes_ASM223467v1_3-c23329716-23329447_ENSORLG00000009881_227                 ------------------------------------------------------------------------------------------
Latimeria-chalumnae_LatCha1_JH126652.1-1371187-1371811_rcn1_766                         TTAAGAGCAAACTATAAAGC--TCCCGTTGAACAATGATATATTCTCTCCCT-------GACTGAAATGACAAGT-GGCCCATTCA-TT-
Microcaecilia-unicolor-N_aMicUni1-1_NC044034.1-c140723304-140722684_NONE_667            GGACATACAAGACAGACAGG---CTCATACAGCAACAATAAATTCTCTCCTC-------CCAAGCCTTGCCTAGT-GGCCTGTTCATT--
Xenopus-tropicalis_v91_4-c9759110-9758467_fgf11_421                                     ----------ACTGGCGAGC---CAGACACAACAATGATATATATATAGCTACTCTATCTACGGCCTACTCTTGT-GGTCCATTCATTTC
Sphenodon-punctatus_ASM311381v1_QEPC01008061.1-c692228-691608_ENSSPUG00000004587_914    TCGTGCACAAGATAGAAAGC---CCTGTAAAACAATGATATATTCTCTGCTT-------GCAAGCCTTGACTACT-GGCCTATTCATT--
Podarcis-muralis-N_PodMur10_NC041312.1-66434474-66435094_NONE_910                       TCAGGCACAAGATCGAAAGC---CCTGTAAAACAATGATATATTCTCGGCTC-------GCAGGCCTTGACTAGT-GGCCCATTCATT--
Anolis-carolinensis_0_1-60922543-60923163_ENSACAG00000002439_887                        TCAGGCGCAAGATCGAAAGC---CCTGTAAAACAATGATATATTCTCGGCTC-------ACAGGCCTTGACTAGT-GGCCCATTCATT--
Python-bivittatus-N_502_NW006532569.1-c68387-67767_NONE_869                             TCTGGTGCAAGATTGAGAGC---TCTGTAAAACAATGATATATTCTCGGCTC-------ACAGGCCTTGACTACT-GGCCCATTCATT--
Protobothrops-mucrosquamatus-N_1-0_NW015388637.1-31923-32543_NONE_860                   TCTGGCGCAAGATTGAGAGC---TCTGTAAAACAATGATATATTCTCAGCTC-------ACAGGCCTTGCCTAGT-GGCCCATTCATT--
Thamnophis-sirtalis-N_6-0_NW013657925.1-491476-492100_NONE_844                          TCTGGCGCAAGATTGAGAGC---TCTTTAAAACAATGATATATTCTCAGCTTGC---AGGCAGGCCTTGCCTAGT-GGCCTATTCATT--
Pseudonaja-textilis-N_EBS10Xv2-PRI_NW020769309.1-c4502074-4501454_NONE_860              TCTGGCGCAAGATTGAGAGC---TCTGTAAAACAATGATATATTCTCAGCTC-------GCAGGCCTTGCCTAGT-GGCCCATTCATT--
Notechis-scutatus_TS10Xv2-PRI_ULFQ01000010.1-15461846-15462466_ENSNSUG00000012105_856   TCTGGCGCAAGATTGAGAGC---TCTGTAAAACAATGATATATTATCAGCTC-------GCAGGCCTTGCCTAGT-GGCCCATTCATT--
Chelonoidis-abingdonii_ASM359739v1_PKMU01004445.1-651872-652492_ENSCABG00000012666_928  TCAAGCACAAGATAGAAAGC---CCTGTAAAACAATGATATATTCTCTACTC-------GCAAGCCTTGACTAGT-GGCCCATTCATT--
Alligator-mississippiensis-N_ASM28112v4_NW017713697.1-28608132-28608752_NONE_919        TCAAGTGCAAGATAGAAAGC---CCTGTAAAACAATGATATATCCTCTGCTT-------GCAAGCCTTGACTAGT-GGCCCATTCATT--
Nothoprocta-perdicaria_notPer1_PTEW01000029.1-c3233217-3232597_ENSNPEG00000007456_928   TCAGGCGCAAGATAGAAAGC---CCTGTAAAACAATGATATATTCTCTGCTT-------GCAAGACTTGCCTAGT-GGCCCATTCATT--
Gallus-gallus_GRCg6a_5-5545349-5545969_ENSGALG00000012121_919                           TCAGGCACAAGATAGAAAGC---CCTGTAAAACAATGATATATTCTCTGCTT-------GCAAGACTTGCCTAGT-GGCCCATTCATT--
Calidris-pugnax_ASM143184v1_KQ482227.1-1593784-1594404_ENSCPUG00000017141_919           TCAAGCGCAAGATAGAAAGC---CCTGTAAAACAATGATATATTCTCTGCTT-------GCAAGACTTGCCTAGT-GGCCCATTCATT--
Ornithorhynchus-anatinus_OANA5_3-18033675-18034294_ENSOANG00000015148_872               CCAAACCCAAGATAGAAAGC---CCTGTAAAACAATGATATATTCTCTGCTT-------GCAAGCCTGGACTAGC-GCACCATCCATT--
Ornithorhynchus-anatinus_OANA5_Ultra43-c272924-272857_NKD2_54                           ------------------------------------------------------------------------------------------
Monodelphis-domestica_monDom5_5-267742398-267743017_ENSMODG00000009625_895              TCAAGTGAAAGATAGAGAGC---CCTGTAAAACAATGATATATCCTCAGCTC-------GCCAGCCTTGACTAGC-GGTCCATTCATT--
Choloepus-hoffmanni_choHof1_scaffold23039-c3496-2877_NONE_1006                          TCCGGCACAAGACAGAGAGC---CCTGTAAAACAATGATATATTCTCTGCTC-------GCCAGCGTTGACGTGT-GGCCTGTTCACT--
Chrysochloris-asiatica-N_ChrAsi1-0_NW006408590.1-7597970-7598590_NONE_1027              TCAGGCACAAGATAGAAAGC---CCTGTAAAACAATGATATATTCTCAGCTT-------GCCAGCATTGACTAGT-GGCCCATTCACTC-
Condylura-cristata-N_ConCri1-0_NW004567116.1-c18302962-18302345_NONE_1019               TCAGGCATGAGATAGAAAGC---CCTGTAAAACAATGATATATTCTCCGCTG-------GCGGTCATTGACTAGA-GGCCCATTCAGT--
Myotis-lucifugus_0_GL429859-3839511-3840129_ENSMLUG00000009140_1031                     TCAGGCACGAGATAGAAAGC---CCTGTAAAACAATGATATATTCTCTGCTC-------ATGGGCATTGACTAGT-GGCCCATTCACT--
Equus-caballus_0_7-99998407-99999021_RCN1_956                                           TCAGGCGCAGGATAGAAAG----CCTGTAAAACAATGATATATTCTCCGCTC-------GCGGGCGTTGACGAGT-GGCCCATTCACT--
Bos-taurus_2_15-62788984-62789604_RCN1_974                                              TCAGGCACAAGATAGAAAGC---CCTGTAAAACAATGATATATTCTTGGCTC-------TTGGGCATCAAGGAGCGGGGCCATTCGCT--
Heterocephalus-glaber-male_0_JH173915.1-848248-848867_ENSHGLG00100011830_1011           TCAGGCCCAAGATAGAAAGC---CCTGTAAAACAATGATATATTCTCCGCCC-------GCAGGCATTGACTGGT-GGCCCATTCACT--
Nannospalax-galili_0_KL199188.1-5296444-5297060_Rcn1_1006                               CCAGGCACAAGATAGAAAGC---CCTGTAAAACAATGATATATTCTCTGCTC-------GCGGGCACTGACTAGT-GGCCCATTCACT--
Mus-musculus_GRCm38_2-c105448179-105447561_Rcn1_1031                                    TCAGGCACAAGATAGAAAGC---CCTGTAAAACAATGATATATTCTCTGCTC-------GCTGGCACTGACTAGT-GGCCCATTCACT--
Propithecus-coquereli_0_KQ022625.1-c4941625-4941006_ENSPCOG00000015851_1042             TCAGGCACAAGATGGAGAGC---CCTGTAAAACAATGATGTATTCTCTGCTC-------GCAGGCGTTGACTAGT-GGCCCATTCACT--
Aotus-nancymaae_0_KZ197012.1-7301836-7302455_ENSANAG00000027955_1083                    TCAGGCACAAGATAGAAAGC---CCTGTAAAACAATGATATATTCTCTGCTC-------GCGGGCATTGACTAGT-GGCCCATTCACT--
Homo-sapiens_GRCh38_11-32031078-32031697_RCN1_1119                                      TCAGGCACAAGATAGAAAGC---CCTGTAAAACAATGATATATTCTCTGCTT-------GCAGGCATTGACTAGT-GGCCCATTCACT--
YOURSEQ1_agCNE2_Homo-sapiens-hg19_GRCh37_11-32052624-32053243                           TCAGGCACAAGATAGAAAGC---CCTGTAAAACAATGATATATTCTCTGCTT-------GCAGGCATTGACTAGT-GGCCCATTCACT--

                                                                                        181
Used4treeSearch                                                                         000001111111111111111111110111111101111111111011111111111011111111111111111111111111111111
Callorhinchus-milii_3_KI635862.1-c11068128-11067509_ENSCMIG00000018083_663              -----TCCTTCACAGTTATTCAAACCGTATTTCC-TCTGCTGATG-CCTCCTCATTT-AAAATCCATTTTAATTTAAAGATGCTCTGTGC
Rhincodon-typus-N_v2_NW018079078.1-c30342-29725_NONE_670                                -----GTCTT--CAGTTATTCAAACTGTACTTCC-TCTGCTGATG-TCCCCTCATTT-AAAATCCATTTTAATTGAAAGATGCTCAGTGC
Erpetoichthys-calabaricus_1_2-56438625-56439249_ENSECRG00000004293_735                  -----TCCAGCGCTGTTCTTCAAACATTATTTCC-TCTGCTGATG-CCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGCTTGACGC
Lepisosteus-oculatus_LepOcu1_LG27-c9547938-9547315_rcn1_767                             -----TCCAGCGCAGTTCTTCAAACATTATTTCC-TCCGTTGATG--CCCCTCATTT-AAAATCCATTTTAATTTAAAGATGCTTGACGC
Danio-rerio_GRCz11_25-15072609-15072910_pax6a_346                                       ------------------------------------------------------------------------------------------
Danio-rerio_GRCz11_25-15072251-15072464_pax6a_103                                       ------------------------------------------------------------------------------------------
Gasterosteus-aculeatus_BROADS1_groupII-c12836068-12835800_rcn1_198                      ------------------------------------------------------------------------------------------
Gasterosteus-aculeatus_BROADS1_groupXIX-1308516-1308623_ENSGACG00000002487_79           ------------------------------------------------------------------------------------------
Tetraodon-nigroviridis_TETRAODON8_5-4275384-4275614_rcn1_180                            ------------------------------------------------------------------------------------------
Tetraodon-nigroviridis_TETRAODON8_Unrandom-21877115-21877223_ENSTNIG00000004771_100     ------------------------------------------------------------------------------------------
Oryzias-latipes_ASM223467v1_3-c23329716-23329447_ENSORLG00000009881_227                 ------------------------------------------------------------------------------------------
Latimeria-chalumnae_LatCha1_JH126652.1-1371187-1371811_rcn1_766                         -----TCCATGGCTGTTCTTCAAACATTATTTCC-TCTGCTGATG-CCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGCTCGATGT
Microcaecilia-unicolor-N_aMicUni1-1_NC044034.1-c140723304-140722684_NONE_667            -----TCTACAGCTGGTTTTCCAACATTCCTTCC-TGCGTTCATA-GCCGCTCATTT-AAAATCCATTTTAATTTAAAGATGCTCTCTGC
Xenopus-tropicalis_v91_4-c9759110-9758467_fgf11_421                                     AACCCTTTANNNNNNNNNNNNNAAGGGGGATTTCGCCCCCTCGTC-CCCTCTCATTTAAAAAGTCATTTTCATTTAAAGATGCTCGCCGC
Sphenodon-punctatus_ASM311381v1_QEPC01008061.1-c692228-691608_ENSSPUG00000004587_914    -----TCTACCGCTGTTCTTCAAACATTACTTCT-TTCGCTCATG-CCCTCTCATTT-AAAATCCATTTTAATTTAAAGATGCTCGATGC
Podarcis-muralis-N_PodMur10_NC041312.1-66434474-66435094_NONE_910                       -----TCTACCGCTGTTCTTCAAACATTACTTCT-TTCGCTCATG-CCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGCTCGGTGC
Anolis-carolinensis_0_1-60922543-60923163_ENSACAG00000002439_887                        -----TCTACCGCTGTTCTTCAAACATTACTTCT-TTCGTTCATG-CCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGCTCGGTGC
Python-bivittatus-N_502_NW006532569.1-c68387-67767_NONE_869                             -----TCTACCGCTGTTCTTCAAACATTACTTCT-TTCGCTCGTG-CCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGCTCGGTGC
Protobothrops-mucrosquamatus-N_1-0_NW015388637.1-31923-32543_NONE_860                   -----TCTACCGCTGTTCTTCAAACATTACTTCT-TTCGCTCGTG-CCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGCTCGGTGC
Thamnophis-sirtalis-N_6-0_NW013657925.1-491476-492100_NONE_844                          -----TCTACCGCTGCTCTTCAAACATTACTTCT-TTCGCTCGTG-CCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGCTCGGTGC
Pseudonaja-textilis-N_EBS10Xv2-PRI_NW020769309.1-c4502074-4501454_NONE_860              -----TCTACCGCTGCTCTTCAAACATTACTTCT-TTCTCTCATG-CCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGCTCGGTGC
Notechis-scutatus_TS10Xv2-PRI_ULFQ01000010.1-15461846-15462466_ENSNSUG00000012105_856   -----TCTACCGCTGCTCTTCAAACATTACTTCT-TTCTCTCATG-CCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGCTCGGTGC
Chelonoidis-abingdonii_ASM359739v1_PKMU01004445.1-651872-652492_ENSCABG00000012666_928  -----TCTACTGCTGTTCTTCAAACATTACTTCC-TTCGCTCATG-CCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGCTCGATGC
Alligator-mississippiensis-N_ASM28112v4_NW017713697.1-28608132-28608752_NONE_919        -----TCTACCGCTGTTCTTCAAACATTACTTCC-TTCACTCATG-CCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGCTCGATGC
Nothoprocta-perdicaria_notPer1_PTEW01000029.1-c3233217-3232597_ENSNPEG00000007456_928   -----TCTACCGCTGTTCTTCAAACATTACTTTC-TTCGCTCATG-CCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGTTCGAGGC
Gallus-gallus_GRCg6a_5-5545349-5545969_ENSGALG00000012121_919                           -----TCTACCGCTGTTCTTCAAACATTACTTTC-TTCGCTCATG-CCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGTTCGATGC
Calidris-pugnax_ASM143184v1_KQ482227.1-1593784-1594404_ENSCPUG00000017141_919           -----TCTACCGCTGTTCTTCAAACATTACTTTC-TTCGCTCATG-CCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGTTCGATGC
Ornithorhynchus-anatinus_OANA5_3-18033675-18034294_ENSOANG00000015148_872               -----TCTACCGTTGTTCTTCAAATAGAGCTTCC-TGTGCTTGTG-CCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGCTCGATAC
Ornithorhynchus-anatinus_OANA5_Ultra43-c272924-272857_NKD2_54                           ------------------------------------------------------------------------------------------
Monodelphis-domestica_monDom5_5-267742398-267743017_ENSMODG00000009625_895              -----CCGACGGCTGTTCCTCAAACATCGCTCCCTTTCGCTCATG-CCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGCGCGAGGC
Choloepus-hoffmanni_choHof1_scaffold23039-c3496-2877_NONE_1006                          -----CCTGGTGCCGTTCTTCAAACA-CGCTCCG-TCCGCTCATG-CCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGCGCGAGGC
Chrysochloris-asiatica-N_ChrAsi1-0_NW006408590.1-7597970-7598590_NONE_1027              -----CCCGGTGCTGTTCTTCAAACA-TGCTCCC-TCCTCTCTTG-CCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGTGCAAGGC
Condylura-cristata-N_ConCri1-0_NW004567116.1-c18302962-18302345_NONE_1019               -----CCCGGTGCTGTTC-TCAAACA-AGCTCCC-TCCGTTCATG-CCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGCGCAAGGC
Myotis-lucifugus_0_GL429859-3839511-3840129_ENSMLUG00000009140_1031                     -----CCTGGTGCTGTTCTTCAAACA-CGCTCCC-TCCGCTCATG-CCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGCGCAAGGC
Equus-caballus_0_7-99998407-99999021_RCN1_956                                           -------TGGCGCTGTTCTTCAAACA-CGCTCCC-GCCACCCGCG-CCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGTGCAAGGC
Bos-taurus_2_15-62788984-62789604_RCN1_974                                              -----GCCGGGGCCGTTCTTCAAACA-CGCTCCC-TCCACTCCTGCCCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGCACAAGGC
Heterocephalus-glaber-male_0_JH173915.1-848248-848867_ENSHGLG00100011830_1011           -----CCTGGGGCTGTTCTTTAAACA-CACTCCC-TCCTTTCATG-CCCTCTCATTT-AAAATCCATTTTAATTTAAAGATGCGCAAGGC
Nannospalax-galili_0_KL199188.1-5296444-5297060_Rcn1_1006                               -----CTGGGTGCTGTTCTTTAAACA-TGCTCCC-TCCTCTCGTG-CCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGCACAAGGC
Mus-musculus_GRCm38_2-c105448179-105447561_Rcn1_1031                                    -----CCTGGCGCCGTTCTTTGAACA-CGCTCCC-TCCGCTCATG-CCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGCGCAAGGC
Propithecus-coquereli_0_KQ022625.1-c4941625-4941006_ENSPCOG00000015851_1042             -----CCCGGTGCTGTTCTTCAGCCG-CGCTCCC-TCTGCTGCTG-CCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGCGCAAGGC
Aotus-nancymaae_0_KZ197012.1-7301836-7302455_ENSANAG00000027955_1083                    -----CCCGGTGCTGTTCTTCAACCA-CGCTCCC-TCCGCTCATG-CCCCCTCATTT-AAAATCCATTTTAATTTAAAGATGCGCAAGGC
Homo-sapiens_GRCh38_11-32031078-32031697_RCN1_1119                                      -----CCCGGTGCTGTTCTTCAACCA-CGCTCCC-TCCGCTCATG-CCCCGTCATTT-AAAATCCATTTTAATTTAAAGATGCACAAGGC
YOURSEQ1_agCNE2_Homo-sapiens-hg19_GRCh37_11-32052624-32053243                           -----CCCGGTGCTGTTCTTCAACCA-CGCTCCC-TCCGCTCATG-CCCCGTCATTT-AAAATCCATTTTAATTTAAAGATGCACAAGGC

                                                                                        271
Used4treeSearch                                                                         111111111111111111111111111111111111111111111101111111100000000000011111111111111101111111
Callorhinchus-milii_3_KI635862.1-c11068128-11067509_ENSCMIG00000018083_663              AGGCACAGTGGTACATTTACTTATCCCAGTTATACATCACGGAGCA-CTAGAAGG------------AGATTGTTTAATCTG-GAGAAGC
Rhincodon-typus-N_v2_NW018079078.1-c30342-29725_NONE_670                                AGACACAGTGGTACATTTACTTATCCCAGTTATACATCACAGAGCA-CTAGAAGA------------AAATTGTTTAATCTG-AAGAAAC
Erpetoichthys-calabaricus_1_2-56438625-56439249_ENSECRG00000004293_735                  ACACCCAGTGGTACATTTACTTATCCCGGTTATACATCACAGAGCAGGGAAAAGA------------AAATTGTTTAATCTA-GAGATAC
Lepisosteus-oculatus_LepOcu1_LG27-c9547938-9547315_rcn1_767                             AGACCCAGTGGTACATTTACTTATCCTGGTTATACATCACGGAGCAAGGAAAGGA------------AAATTGTTTAATCTA-GAGATAC
Danio-rerio_GRCz11_25-15072609-15072910_pax6a_346                                       ------------------------------------------------------------------------------------------
Danio-rerio_GRCz11_25-15072251-15072464_pax6a_103                                       ------------------------------------------------------------------------------------------
Gasterosteus-aculeatus_BROADS1_groupII-c12836068-12835800_rcn1_198                      ------------------------------------------------------------------------------------------
Gasterosteus-aculeatus_BROADS1_groupXIX-1308516-1308623_ENSGACG00000002487_79           ------------------------------------------------------------------------------------------
Tetraodon-nigroviridis_TETRAODON8_5-4275384-4275614_rcn1_180                            ------------------------------------------------------------------------------------------
Tetraodon-nigroviridis_TETRAODON8_Unrandom-21877115-21877223_ENSTNIG00000004771_100     ------------------------------------------------------------------------------------------
Oryzias-latipes_ASM223467v1_3-c23329716-23329447_ENSORLG00000009881_227                 ------------------------------------------------------------------------------------------
Latimeria-chalumnae_LatCha1_JH126652.1-1371187-1371811_rcn1_766                         AGACCTAGTGGTACATTTACTTATCCTGGTTATACATCATGGAGCAAGGAAAAGA------------AAATTGTTTAATCTA-CAGATAC
Microcaecilia-unicolor-N_aMicUni1-1_NC044034.1-c140723304-140722684_NONE_667            AGACCTAGAGGTACATTTACTCATCCTAGTTATACATCATGGAGCAGGGAAAAGA------------AAATTGTTTAATCTC-GAGATAC
Xenopus-tropicalis_v91_4-c9759110-9758467_fgf11_421                                     AGTCCTAGTGGTACATTTACTCGTCCTAGTTATACATCATGAAGCGGCGAGGGGGCGANNNNNNNNNAAATTGTTTAATCTACGAGATAC
Sphenodon-punctatus_ASM311381v1_QEPC01008061.1-c692228-691608_ENSSPUG00000004587_914    AGTCCTAGTGGTACATTTACTCATCCTAGTTATACATCATGGAGCAGGGAAAAGA------------AAATTGTTTAATCTA-GAGATAC
Podarcis-muralis-N_PodMur10_NC041312.1-66434474-66435094_NONE_910                       CGTCCTAGTGGTACATTTACTCATCCTAGTTATACATCATGGAGCAGGGAAAAGA------------AAATTGTTTAATCTA-GAGATAC
Anolis-carolinensis_0_1-60922543-60923163_ENSACAG00000002439_887                        CGTCCTAGTGGTACATTTACTCATCCTAGTTATACATCATGGAGCAGGGAAAAGA------------AAATTGTTTAATCTA-GAGATAC
Python-bivittatus-N_502_NW006532569.1-c68387-67767_NONE_869                             CGTCCTAGTGGTACATTTACTCATCCTAGTTATACATCATGGAGCAGGGAAAAGA------------AAATTGTTTAATCTA-GAGATAC
Protobothrops-mucrosquamatus-N_1-0_NW015388637.1-31923-32543_NONE_860                   CATCCTAGTGATACATTTACTCATCCTAGTTATACATCATGGAGCAGGGAAAAGA------------AAATTGTTTAATCTA-GAGATAC
Thamnophis-sirtalis-N_6-0_NW013657925.1-491476-492100_NONE_844                          CGTCTTAGTGATACATTTACTCATCCTAGTTATACATCATGGAGCAGGGAAAAGA------------AAATTGTTTAATCTA-GAGATAC
Pseudonaja-textilis-N_EBS10Xv2-PRI_NW020769309.1-c4502074-4501454_NONE_860              CGTCTTAGTGATACATTTACTCATCCTAGTTATACATCATGGAGCAGGGAAAAGA------------AAATTGTTTAATCTA-GAGATAC
Notechis-scutatus_TS10Xv2-PRI_ULFQ01000010.1-15461846-15462466_ENSNSUG00000012105_856   CGTCTTAGTGATACATTTACTCATCCTAGTTATACATCATGGAGCAGGGAAAAGA------------AAATTGTTTAATCTA-GAGATAC
Chelonoidis-abingdonii_ASM359739v1_PKMU01004445.1-651872-652492_ENSCABG00000012666_928  ACTCCTAGCGGTACATTTACTCATCCTAGTTATACATCATGGAGCAGGGAAAAGA------------AAATTGTTTAATCTA-GAGATAT
Alligator-mississippiensis-N_ASM28112v4_NW017713697.1-28608132-28608752_NONE_919        AGTCCTAGTGGTACATTTACTCATCCTAGTTATACATCATGGAGCAGGGAAAAGA------------AAATTGTTTAATCTA-GAGATAC
Nothoprocta-perdicaria_notPer1_PTEW01000029.1-c3233217-3232597_ENSNPEG00000007456_928   AGTCCTAGTGGTACATTTACTCATCCTGGTTATACATCATGGAGCAGGGAAAAGA------------AAATTGTTTAATCTA-GAGATAC
Gallus-gallus_GRCg6a_5-5545349-5545969_ENSGALG00000012121_919                           AGTCCTAGTGGTACATTTACTCATCCTGGTTATACATCACGGAGCAGGGAAAAGA------------AAATTGTTTAATCTA-GAGATAC
Calidris-pugnax_ASM143184v1_KQ482227.1-1593784-1594404_ENSCPUG00000017141_919           AGTCCTAGTGGTACATTTACTCATCCTGGTTATACATCATGGAGCAGGGAAAAGA------------AAATTGTTTAATCTA-GAGATAC
Ornithorhynchus-anatinus_OANA5_3-18033675-18034294_ENSOANG00000015148_872               AGTCCTGGTGGTACATTTACTCATCCTGGTTATACATCATGGAGCAAGGAAAAGA------------AAATTGTTTAATCTA-GAGATAC
Ornithorhynchus-anatinus_OANA5_Ultra43-c272924-272857_NKD2_54                           ------------------------------------------------------------------------------------------
Monodelphis-domestica_monDom5_5-267742398-267743017_ENSMODG00000009625_895              AGTCCTAGTGGTACACTTACTCATCCTAGTTATATATCATGGAGCAAGGAAAAGA------------AAATTGTTTAATCTA-GAGATAC
Choloepus-hoffmanni_choHof1_scaffold23039-c3496-2877_NONE_1006                          AGTGCTCGTGGTACATTTACTCATCCTAGTTATACATCATGGAGCAAGGAAAAGA------------AAATTGTTTCATCTA-GAGATAC
Chrysochloris-asiatica-N_ChrAsi1-0_NW006408590.1-7597970-7598590_NONE_1027              AGTGCTCCTGGTACATTTACTCATCCTAGTTATACATCATGGAGCAAGGAAAAGA------------AAATTGTTTCATCTA-GAGATAC
Condylura-cristata-N_ConCri1-0_NW004567116.1-c18302962-18302345_NONE_1019               AGTGCTCGTGGTACATTTATTCATCCTAGTTATACATCATGGAGCAAGGAAAAGA------------AAATTGTTTCATCTA-GAGATAC
Myotis-lucifugus_0_GL429859-3839511-3840129_ENSMLUG00000009140_1031                     AATGCTCGTGGTACATTTACTCATCCTAGTTATACATCATGGAGCAAGGGAAAGA------------AAATTGTTTCATCTA-GAGATAC
Equus-caballus_0_7-99998407-99999021_RCN1_956                                           AGTGCTCGTGGTACATTTACTCGTCCTAGTTATACATCATGGAGCAGGGAAAAGA------------AAATTGTTTCATCTG-GAGATGC
Bos-taurus_2_15-62788984-62789604_RCN1_974                                              AGTGCTCGTGGTCCATTTAGTCATCCTAGTTATACATCATGGAGCAAGGAAAAGA------------AAATTGTTTCATCTA-GAGATAC
Heterocephalus-glaber-male_0_JH173915.1-848248-848867_ENSHGLG00100011830_1011           AGTGCTCGTGGTACATTTACTCATCCTAGTTATACATCATGGAGCAAGGAAAAGA------------AAATTGTTTCATCTA-GAGATAC
Nannospalax-galili_0_KL199188.1-5296444-5297060_Rcn1_1006                               A-TGCTCCTGGTACATTTACTCATCCTGGTTATACATCATGGAGCAAGGAAAAGA------------AAATTGTTTCATCTA-GAGATAC
Mus-musculus_GRCm38_2-c105448179-105447561_Rcn1_1031                                    AGTGCTCGTGGTACATTTACTCAGCCTAGTTATACATCATGGAGCAAGGAAAAGA------------AAATTGTTTCATCTA-GAGATAC
Propithecus-coquereli_0_KQ022625.1-c4941625-4941006_ENSPCOG00000015851_1042             AGTGCTCGTGGTACATTTACTCATCCTAGTTATACATCATGGAGCAAGGAAAAGA------------AAATTGTTTCATCTA-GAGATAC
Aotus-nancymaae_0_KZ197012.1-7301836-7302455_ENSANAG00000027955_1083                    AGTGCTCGTGGTACATTTACTCATCCTAGTTATACATCATGGAGCAAGGAAAAGA------------AAATTGTTTCATCTA-GAGATAC
Homo-sapiens_GRCh38_11-32031078-32031697_RCN1_1119                                      AGTGCTCGTGGTACATTTACTCATCCTAGTTATACATCATGGAGCAAGGAAAAGA------------AAATTGTTTCATCTA-GAGATAC
YOURSEQ1_agCNE2_Homo-sapiens-hg19_GRCh37_11-32052624-32053243                           AGTGCTCGTGGTACATTTACTCATCCTAGTTATACATCATGGAGCAAGGAAAAGA------------AAATTGTTTCATCTA-GAGATAC

                                                                                        361
Used4treeSearch                                                                         111111111111111111111011111111111111111111111111111111111110000000000000001111111111111111
Callorhinchus-milii_3_KI635862.1-c11068128-11067509_ENSCMIG00000018083_663              AGTTCATGGTGGTCACCGCTG-AACAGCAGAGTAATTACAAGATCAGATCTGCTAAAAA---------------TGCACTCAGAGTGTTC
Rhincodon-typus-N_v2_NW018079078.1-c30342-29725_NONE_670                                AGTTCATGGTGGTCACCACTG-AACAGCAGAGTAATTACAAGATCAGATCTGCTATAAA---------------TGCACTCAGGGTGTTC
Erpetoichthys-calabaricus_1_2-56438625-56439249_ENSECRG00000004293_735                  GGTTCAGCGTGGTCACTGCTG-AACAGCAGAGTAATTACAAGATCAGCTCCACTAAAAC---------------TGCACTCAGAGTATTC
Lepisosteus-oculatus_LepOcu1_LG27-c9547938-9547315_rcn1_767                             GGTTCAGCGTGGTCACTGCTG-AACACTGGAGTAATTACCAGATCAGCTCTACTAAAAA---------------TGCACTCAGGGTGTTC
Danio-rerio_GRCz11_25-15072609-15072910_pax6a_346                                       GGTTCAGCTTGGTCACAGCCGAAACAGGGGAGTAATTACCAGATCAGCTCTGCTAAAAA---------------TGCAGGCTGGGTGTTC
Danio-rerio_GRCz11_25-15072251-15072464_pax6a_103                                       ------------------------------------------------------------------------------------------
Gasterosteus-aculeatus_BROADS1_groupII-c12836068-12835800_rcn1_198                      -------------------------------GTAATTACTAGATCAAATCTGCTCAAAT---------------TGAGGCAACGCTGTTC
Gasterosteus-aculeatus_BROADS1_groupXIX-1308516-1308623_ENSGACG00000002487_79           ------------------------------------------------------------------------------------------
Tetraodon-nigroviridis_TETRAODON8_5-4275384-4275614_rcn1_180                            -------------------------------------------------------------------------------------TGCTC
Tetraodon-nigroviridis_TETRAODON8_Unrandom-21877115-21877223_ENSTNIG00000004771_100     ------------------------------------------------------------------------------------------
Oryzias-latipes_ASM223467v1_3-c23329716-23329447_ENSORLG00000009881_227                 ------------------------------AGTAATTACTAGATCAAATCTGTTCAAAC---------------TGAAGCAACGCTTTTC
Latimeria-chalumnae_LatCha1_JH126652.1-1371187-1371811_rcn1_766                         GGTTCAATGTGGTCACTGCTG-AACAGCGGAGTAATTACCAAATCAGCTCCACTAAAAA---------------TGCACTCAGGGTGTTC
Microcaecilia-unicolor-N_aMicUni1-1_NC044034.1-c140723304-140722684_NONE_667            AGTTCAATCTGGTCACCAATG-GAGAGCGTAGTAATTACCAGATCAGCTCCAGTAAAAA---------------TGCAGTGAGGCAGCTC
Xenopus-tropicalis_v91_4-c9759110-9758467_fgf11_421                                     GGTTCACTGTGGTCACCAGCG-AACAGTACAGTAATTACCAGATCGGCTCGACTTTAGNNNNNNNNNNTTTATCCGCTGGAAGGGTCCTG
Sphenodon-punctatus_ASM311381v1_QEPC01008061.1-c692228-691608_ENSSPUG00000004587_914    GGTTCAATGTGGTCACCACTG-AACAGTGGAGTAATTACCAGATCAGCTCTGCTAAAAA---------------TGCACTCAGGGTGTTC
Podarcis-muralis-N_PodMur10_NC041312.1-66434474-66435094_NONE_910                       GGTTCAATGTGGTCACCACTG-AACAGTGGAGTAATTACCAGATCAGCTCCGCTAAAAA---------------TGCACTCAGGGTGTTC
Anolis-carolinensis_0_1-60922543-60923163_ENSACAG00000002439_887                        GGTTCAATGTGGTCACCACTG-AACAGTGGAGTAATTACCAGATCAGCTCCGCTAAAAA---------------TGCACTCAGGGTGTTC
Python-bivittatus-N_502_NW006532569.1-c68387-67767_NONE_869                             GGTTCAATGTGGTCACCATTG-AACAGTGGAGTAATTACCAGATCAGCTCCGCTAAAAA---------------TGCACTCAGGGTGTTC
Protobothrops-mucrosquamatus-N_1-0_NW015388637.1-31923-32543_NONE_860                   GGTTCAATGTGGTCACCATTG-AACAGTGGAGTAATTACCAGATCAGCTCTGCTAAAAA---------------TGCACTCAGGGTGTTC
Thamnophis-sirtalis-N_6-0_NW013657925.1-491476-492100_NONE_844                          GGTTCAATGTGGTCACCATTG-AACAGTGGAGTAATTACCAGATCAGCTCTGCTAAAAA---------------TGCAGTCAGGGTGTTC
Pseudonaja-textilis-N_EBS10Xv2-PRI_NW020769309.1-c4502074-4501454_NONE_860              GGTTCAATGTGGTCACCATTG-AACAGTGGAGTAATTACCAGATCAGCTCTGCTAAAAA---------------TGCACTCAGGGTGTTC
Notechis-scutatus_TS10Xv2-PRI_ULFQ01000010.1-15461846-15462466_ENSNSUG00000012105_856   GGTTCAATGTGGTCACCATTG-AACAGTGGAGTAATTACCAGATCAGCTCTGCTAAAAA---------------TGCACTCAGGGTGTTC
Chelonoidis-abingdonii_ASM359739v1_PKMU01004445.1-651872-652492_ENSCABG00000012666_928  GGTTCAATGTGGTCACCACTG-AACAGTGGAGTAATTACCAGATCAGCTCCGCTAAAAA---------------TGCACTCAGGGTGTTC
Alligator-mississippiensis-N_ASM28112v4_NW017713697.1-28608132-28608752_NONE_919        GGTTCACTGTGGTCACCACTG-AACAGTGGAGTAATTACCAGATCAGCTCTGCTAAAAA---------------TGCACTCAGGGTGTTC
Nothoprocta-perdicaria_notPer1_PTEW01000029.1-c3233217-3232597_ENSNPEG00000007456_928   GGTTCACTGTGGTCACCACTG-AACAGTGGAGTAATTACCAGATCAGCTCCGCTAAAAA---------------TGCACTCAGGGTGTTC
Gallus-gallus_GRCg6a_5-5545349-5545969_ENSGALG00000012121_919                           GGTTCACTGTGGTCACCACTG-AACAGTGGAGTAATTACCAGATCAGCTCCGCTAAAAA---------------TGCACTCAGGGTGTTC
Calidris-pugnax_ASM143184v1_KQ482227.1-1593784-1594404_ENSCPUG00000017141_919           GGTTCACTGTGGTCACCACTG-AACAGTGGAGTAATTACCAGATCAGCTCCGCTAAAAA---------------TGCACTCAGGGTGTTC
Ornithorhynchus-anatinus_OANA5_3-18033675-18034294_ENSOANG00000015148_872               GGTTCAATGTGGTCACCACTG-AACAGTGGAGTAATTACGAGATCAGCTCTGCTAAAAA---------------TGCACTCAGGATGTTC
Ornithorhynchus-anatinus_OANA5_Ultra43-c272924-272857_NKD2_54                           ------------------------------------------------------------------------------------------
Monodelphis-domestica_monDom5_5-267742398-267743017_ENSMODG00000009625_895              GGTTCAATGTGGTCACCACTG-AACAGTGGAGTAATTACCATATCAGCCCCGCTAAAAA---------------TGCACTCAGGGTGTTC
Choloepus-hoffmanni_choHof1_scaffold23039-c3496-2877_NONE_1006                          GGTTCAATGTGGTCACCACTG-AACAGTGGAGTAATTACCATATCAGGCCCACTCAAAA---------------TGCACTCAGGGTGTTC
Chrysochloris-asiatica-N_ChrAsi1-0_NW006408590.1-7597970-7598590_NONE_1027              GGTTCAATGTGGTCACCACTG-AACAGTGGAGTAATTACCATATCAGGCCCACTCAAAA---------------TGCACTCAGGGTGTTC
Condylura-cristata-N_ConCri1-0_NW004567116.1-c18302962-18302345_NONE_1019               GGTTCAATGTGGTCACCGCTG-AACAGTGGAGTAATTACCATATCAGGCCCACTCAAAA---------------TGCACTCAGGGTGTTC
Myotis-lucifugus_0_GL429859-3839511-3840129_ENSMLUG00000009140_1031                     GGTTCAATGTGGTCACCACTG-AACAGTGGAGTAATTACCATATCAGGCCCACTCAAAA---------------TGCACTCAGGGTGTTC
Equus-caballus_0_7-99998407-99999021_RCN1_956                                           GGTTCAGTGTGGTCACCACTG-AGCAGTGGAGTAATTACCGTATCAGACCCACTCCAAA---------------TGCACTCAGGGCGTTC
Bos-taurus_2_15-62788984-62789604_RCN1_974                                              GGTTCAATGTGGTCACCGCTG-AACAGTGGAGTAATTACCATATCAGGCCCACTCAAAA---------------TGCACTCAGGGTGTTC
Heterocephalus-glaber-male_0_JH173915.1-848248-848867_ENSHGLG00100011830_1011           GGTTCACTGTGGTCACCACTG-AACAGTGGAGTAATTACCATATCAGGCCCACTCAAAA---------------TGCACTCAGGGTGTTC
Nannospalax-galili_0_KL199188.1-5296444-5297060_Rcn1_1006                               GGTTCAATGTGGTCACCACTG-AACAGTAGAGTAATTACCATATCAGGCCCACTCAAAA---------------TGCACTCAGGGTGTTC
Mus-musculus_GRCm38_2-c105448179-105447561_Rcn1_1031                                    GGTTCAATGTGGTCACCACTG-AACAGTGGAGTAATTACCATATCAGGCCCACTCAAAA---------------TGCACTCAGGGTGTTC
Propithecus-coquereli_0_KQ022625.1-c4941625-4941006_ENSPCOG00000015851_1042             GGTTCAATGTGGTCACCACTG-AACAGTGGAGTAATTACCATATCAGGCCCACTCAAAA---------------TGCACTCAGGGTGTTC
Aotus-nancymaae_0_KZ197012.1-7301836-7302455_ENSANAG00000027955_1083                    GGTTCAATGTGGTCACCACTG-AACAGTGGAGTAATTACCATATCAGGCCCACTCAAAA---------------TGCACTCAGGGTGTTC
Homo-sapiens_GRCh38_11-32031078-32031697_RCN1_1119                                      GGTTCAATGTGGTCACCACTG-AACAGTGGAGTAATTACCATATCAGACCCACTCAAAA---------------TGCACTCAGGGTGTTC
YOURSEQ1_agCNE2_Homo-sapiens-hg19_GRCh37_11-32052624-32053243                           GGTTCAATGTGGTCACCACTG-AACAGTGGAGTAATTACCATATCAGACCCACTCAAAA---------------TGCACTCAGGGTGTTC

                                                                                        451
Used4treeSearch                                                                         111111111111111111111111111111111111111111111111111111111111111111111111011111111111100000
Callorhinchus-milii_3_KI635862.1-c11068128-11067509_ENSCMIG00000018083_663              TGTGACCTATCATCTCCTAATCTGCATAGTGAAGTATTGCTTCATAACTATAAATTGCTGATTTAATTAAAA-CCAGGACCTTTC-----
Rhincodon-typus-N_v2_NW018079078.1-c30342-29725_NONE_670                                TGTGACCTATCATCTTCTAATCTGCATAGTGAAGTATTGCTTCATAACTGTAAATTGCTGATTTAATTAAAA-CCAAGACCTTTC-----
Erpetoichthys-calabaricus_1_2-56438625-56439249_ENSECRG00000004293_735                  TGTGACCTATCATCTCCTAATCTGCATAGTGAAGTATGGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Lepisosteus-oculatus_LepOcu1_LG27-c9547938-9547315_rcn1_767                             TGTGACCTATCATCTCCTAATCTGCATAGTGAAGTATGGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Danio-rerio_GRCz11_25-15072609-15072910_pax6a_346                                       GCTGACCTATCATCCACTAATCTGCATAGTGAAGTATAGCTTCATAACTGTAAATTGCTGACTTAATTAAAAGCTGGGACCTTTC-----
Danio-rerio_GRCz11_25-15072251-15072464_pax6a_103                                       ------------------------------------------------------------------------------------------
Gasterosteus-aculeatus_BROADS1_groupII-c12836068-12835800_rcn1_198                      TGTGATCCCTCCTATACTAATCAGCACGCTGAGGTATGGCGGTGCGACTATAAATTGCTGACTTAATT-AAAACCCGGACCTCTC-----
Gasterosteus-aculeatus_BROADS1_groupXIX-1308516-1308623_ENSGACG00000002487_79           -----------------------------------------------------ATTGCTGACTTCATTAAG--GCAGGCCTCCTCTCCCT
Tetraodon-nigroviridis_TETRAODON8_5-4275384-4275614_rcn1_180                            CGTGATCCCTCCTATACTAATCAGTATGCTGAGGTATGTCTCCCAGACCATAAATTGTTGACTTAATTAAAAACCAGGACCCCTC-----
Tetraodon-nigroviridis_TETRAODON8_Unrandom-21877115-21877223_ENSTNIG00000004771_100     --------------------------------------------------TAAATTGCTGACTTCATTAAA--TCAGACCTCCTC-----
Oryzias-latipes_ASM223467v1_3-c23329716-23329447_ENSORLG00000009881_227                 TGTGGTCCCTCCTATACTAATCAGCATGCTGAGGTATGGCTGTGTGACTATAAATTGCTGACTTAATT-AAAACCAGGACCTTTC-----
Latimeria-chalumnae_LatCha1_JH126652.1-1371187-1371811_rcn1_766                         TGTGACCTATCATCTCCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CTAGGACCTTTC-----
Microcaecilia-unicolor-N_aMicUni1-1_NC044034.1-c140723304-140722684_NONE_667            TGTGACCTATCAGTGCCTAATCTGCATAGTGAAGTATGGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Xenopus-tropicalis_v91_4-c9759110-9758467_fgf11_421                                     TGTAACCTATCATTCCCTAATCTGCATAGTGAAATACTGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Sphenodon-punctatus_ASM311381v1_QEPC01008061.1-c692228-691608_ENSSPUG00000004587_914    TGTGACCTATCATCTTCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Podarcis-muralis-N_PodMur10_NC041312.1-66434474-66435094_NONE_910                       TGTGACCTATCATCTTCTAATCTGCATAGTGAAGTACAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Anolis-carolinensis_0_1-60922543-60923163_ENSACAG00000002439_887                        TGTGACCTATCATCTTCTAATCTGCATAGTGAAGTATGGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Python-bivittatus-N_502_NW006532569.1-c68387-67767_NONE_869                             TGTGACCTATCATCTTCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Protobothrops-mucrosquamatus-N_1-0_NW015388637.1-31923-32543_NONE_860                   TGTGACCTATCATCTTCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Thamnophis-sirtalis-N_6-0_NW013657925.1-491476-492100_NONE_844                          TGTGACCTATCATCTTCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Pseudonaja-textilis-N_EBS10Xv2-PRI_NW020769309.1-c4502074-4501454_NONE_860              TGTGACCTATCATCTTCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Notechis-scutatus_TS10Xv2-PRI_ULFQ01000010.1-15461846-15462466_ENSNSUG00000012105_856   TGTGACCTATCATCTTCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Chelonoidis-abingdonii_ASM359739v1_PKMU01004445.1-651872-652492_ENSCABG00000012666_928  TGTGACCTATCATCTTCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Alligator-mississippiensis-N_ASM28112v4_NW017713697.1-28608132-28608752_NONE_919        TGTGACCTATCATCTTCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Nothoprocta-perdicaria_notPer1_PTEW01000029.1-c3233217-3232597_ENSNPEG00000007456_928   TGTGACCTATCATCTTCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Gallus-gallus_GRCg6a_5-5545349-5545969_ENSGALG00000012121_919                           TGTGACCTATCATCTTCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Calidris-pugnax_ASM143184v1_KQ482227.1-1593784-1594404_ENSCPUG00000017141_919           TGTGACCTATCATCTTCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Ornithorhynchus-anatinus_OANA5_3-18033675-18034294_ENSOANG00000015148_872               TGTGACCTATCATCTGCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Ornithorhynchus-anatinus_OANA5_Ultra43-c272924-272857_NKD2_54                           --------------------------------------------------------------------------------CTTTC-----
Monodelphis-domestica_monDom5_5-267742398-267743017_ENSMODG00000009625_895              TGTGACCTATCATGTGCTAATCTTCATGGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Choloepus-hoffmanni_choHof1_scaffold23039-c3496-2877_NONE_1006                          TGTGACCTATCATTTGCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Chrysochloris-asiatica-N_ChrAsi1-0_NW006408590.1-7597970-7598590_NONE_1027              TGTGACCTATCATTTGCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Condylura-cristata-N_ConCri1-0_NW004567116.1-c18302962-18302345_NONE_1019               TGTGACCTATCATTTGCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Myotis-lucifugus_0_GL429859-3839511-3840129_ENSMLUG00000009140_1031                     CGTGACCTATCATTTGCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Equus-caballus_0_7-99998407-99999021_RCN1_956                                           TGTGACCTATCATTTGCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAAGACCTTTC-----
Bos-taurus_2_15-62788984-62789604_RCN1_974                                              TGTGACCTACCATTTGCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Heterocephalus-glaber-male_0_JH173915.1-848248-848867_ENSHGLG00100011830_1011           TGTGACCTATCATTTGCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Nannospalax-galili_0_KL199188.1-5296444-5297060_Rcn1_1006                               TGTGACCTATCATTTCCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Mus-musculus_GRCm38_2-c105448179-105447561_Rcn1_1031                                    TGTGACCTATCATCTGCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Propithecus-coquereli_0_KQ022625.1-c4941625-4941006_ENSPCOG00000015851_1042             TGTGACCTATCATTTGCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Aotus-nancymaae_0_KZ197012.1-7301836-7302455_ENSANAG00000027955_1083                    TGTGACCTATCATTTGCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAGGACCTTTC-----
Homo-sapiens_GRCh38_11-32031078-32031697_RCN1_1119                                      TGTGACCTATCATTTGCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAAGACCTTTC-----
YOURSEQ1_agCNE2_Homo-sapiens-hg19_GRCh37_11-32052624-32053243                           TGTGACCTATCATTTGCTAATCTGCATAGTGAAGTATAGCTTCATAACTATAAATTGCTGACTTAATTAAAA-CCAAGACCTTTC-----

                                                                                        541
Used4treeSearch                                                                         111111111100111111111100000111111111111111111111111111111111111111111111111111111111111011
Callorhinchus-milii_3_KI635862.1-c11068128-11067509_ENSCMIG00000018083_663              TGTCATTTAA--TTACAGAGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACGGCTT-TG
Rhincodon-typus-N_v2_NW018079078.1-c30342-29725_NONE_670                                TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-TG
Erpetoichthys-calabaricus_1_2-56438625-56439249_ENSECRG00000004293_735                  TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
Lepisosteus-oculatus_LepOcu1_LG27-c9547938-9547315_rcn1_767                             TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CG
Danio-rerio_GRCz11_25-15072609-15072910_pax6a_346                                       TGTCATTTAA--TTACAGGGAG----AAAAGGTTATTGCTTAAACGCAATTTTCCAAATGCGATTTCTTAACAGTTATTAACGGCGT-CG
Danio-rerio_GRCz11_25-15072251-15072464_pax6a_103                                       TGCCGCCCAA-----------------AGAGCCATTCATCCTCAAACACTTCCTCAAACATTATTCCCT-----CCATTGATGCCCC---
Gasterosteus-aculeatus_BROADS1_groupII-c12836068-12835800_rcn1_198                      AGTCATCTAA--TTACAGGCAG----AAAAGGTTATTGCTTCAATGCAATTTTCCAAATACGATTCCCTCACAGTTATTAAAGGCTC-AG
Gasterosteus-aculeatus_BROADS1_groupXIX-1308516-1308623_ENSGACG00000002487_79           ACTCATTTAA--TTAGGAGAG------AAAGGTTAGTGCCACAATGCAATTTACCAAATGTGATTTCCTAGCAGCTATTAA---------
Tetraodon-nigroviridis_TETRAODON8_5-4275384-4275614_rcn1_180                            TGTCATCTAA--TTACAGGGAG----AAAAGGTTATTGCTTCAATGCAATTTTCCAAATATGATTCCTTCACAGTTATTAAGGGCTC-AG
Tetraodon-nigroviridis_TETRAODON8_Unrandom-21877115-21877223_ENSTNIG00000004771_100     ACTCATTTAA--TTACTAGAGA-----AAAGGTTAACGCCAGGATGCAATTTACCAAATGTGATTTCTTAGCAGCTATTAACT-------
Oryzias-latipes_ASM223467v1_3-c23329716-23329447_ENSORLG00000009881_227                 TGTCATCTAA--TTACAGGGAG----AAAAGGTTATAGCTTCAATGCAATTTTCCAACTATGATTCCTTCACAGTTATTAAAGGCTC-AG
Latimeria-chalumnae_LatCha1_JH126652.1-1371187-1371811_rcn1_766                         TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACGGCTTGCG
Microcaecilia-unicolor-N_aMicUni1-1_NC044034.1-c140723304-140722684_NONE_667            TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAAGTGCTC-TG
Xenopus-tropicalis_v91_4-c9759110-9758467_fgf11_421                                     TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCTAAATGTGATTTCTTAACAGTTATTAACAGCTT-CC
Sphenodon-punctatus_ASM311381v1_QEPC01008061.1-c692228-691608_ENSSPUG00000004587_914    TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
Podarcis-muralis-N_PodMur10_NC041312.1-66434474-66435094_NONE_910                       TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
Anolis-carolinensis_0_1-60922543-60923163_ENSACAG00000002439_887                        TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
Python-bivittatus-N_502_NW006532569.1-c68387-67767_NONE_869                             TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
Protobothrops-mucrosquamatus-N_1-0_NW015388637.1-31923-32543_NONE_860                   TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
Thamnophis-sirtalis-N_6-0_NW013657925.1-491476-492100_NONE_844                          TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
Pseudonaja-textilis-N_EBS10Xv2-PRI_NW020769309.1-c4502074-4501454_NONE_860              TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
Notechis-scutatus_TS10Xv2-PRI_ULFQ01000010.1-15461846-15462466_ENSNSUG00000012105_856   TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
Chelonoidis-abingdonii_ASM359739v1_PKMU01004445.1-651872-652492_ENSCABG00000012666_928  TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
Alligator-mississippiensis-N_ASM28112v4_NW017713697.1-28608132-28608752_NONE_919        TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
Nothoprocta-perdicaria_notPer1_PTEW01000029.1-c3233217-3232597_ENSNPEG00000007456_928   TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
Gallus-gallus_GRCg6a_5-5545349-5545969_ENSGALG00000012121_919                           TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
Calidris-pugnax_ASM143184v1_KQ482227.1-1593784-1594404_ENSCPUG00000017141_919           TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
Ornithorhynchus-anatinus_OANA5_3-18033675-18034294_ENSOANG00000015148_872               TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
Ornithorhynchus-anatinus_OANA5_Ultra43-c272924-272857_NKD2_54                           TGTGATTTCAGTTTACAGGGACCTGCAAAAGTTTACTGCTTGAATTTAATTTTCCAAATGTGA---------------------------
Monodelphis-domestica_monDom5_5-267742398-267743017_ENSMODG00000009625_895              TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACGGCTT-CA
Choloepus-hoffmanni_choHof1_scaffold23039-c3496-2877_NONE_1006                          TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
Chrysochloris-asiatica-N_ChrAsi1-0_NW006408590.1-7597970-7598590_NONE_1027              TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
Condylura-cristata-N_ConCri1-0_NW004567116.1-c18302962-18302345_NONE_1019               TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
Myotis-lucifugus_0_GL429859-3839511-3840129_ENSMLUG00000009140_1031                     TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
Equus-caballus_0_7-99998407-99999021_RCN1_956                                           TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
Bos-taurus_2_15-62788984-62789604_RCN1_974                                              TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
Heterocephalus-glaber-male_0_JH173915.1-848248-848867_ENSHGLG00100011830_1011           TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAGATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACAGCTT-CA
Nannospalax-galili_0_KL199188.1-5296444-5297060_Rcn1_1006                               TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
Mus-musculus_GRCm38_2-c105448179-105447561_Rcn1_1031                                    TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
Propithecus-coquereli_0_KQ022625.1-c4941625-4941006_ENSPCOG00000015851_1042             TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
Aotus-nancymaae_0_KZ197012.1-7301836-7302455_ENSANAG00000027955_1083                    TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
Homo-sapiens_GRCh38_11-32031078-32031697_RCN1_1119                                      TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA
YOURSEQ1_agCNE2_Homo-sapiens-hg19_GRCh37_11-32052624-32053243                           TGTCATTTAA--TTACAGGGAG-----AAAGGTTATTGCTTAAATGCAATTTTCCAAATGTGATTTCTTAACAGTTATTAACTGCTT-CA

                                                                                        631
Used4treeSearch                                                                         1111111111111111111111001111111111111111111111101111111111111
Callorhinchus-milii_3_KI635862.1-c11068128-11067509_ENSCMIG00000018083_663              CCATCATTTATTGTTTCTGA-T--TTTCAATTTTAAAATGGT-CTTG-TGACAGAAGTAAT
Rhincodon-typus-N_v2_NW018079078.1-c30342-29725_NONE_670                                CCATCATTTATTGTTTCTGA-T--TTTCAATTTTAAAATGGT-CCTG-TGACAGAAGTAAT
Erpetoichthys-calabaricus_1_2-56438625-56439249_ENSECRG00000004293_735                  CCATCATTTATTGTTTCAGAAT--TTTCAATTTGGAAATGGTCCCGA-TGACAGAAGTAAT
Lepisosteus-oculatus_LepOcu1_LG27-c9547938-9547315_rcn1_767                             CCATCATTTATTGTTTCAGATT--TTTCAATTTGGAAATGGTCCCAG-TGACAGAAGTAAT
Danio-rerio_GRCz11_25-15072609-15072910_pax6a_346                                       CTATCATTTATTGTTTCAGATT--TTTCAATTTGGAAATGGCCGCCGCTGACAGAAGTAAT
Danio-rerio_GRCz11_25-15072251-15072464_pax6a_103                                       ----------TCATTTTAAATCTATTTCAATTTAAAGATGC--------------------
Gasterosteus-aculeatus_BROADS1_groupII-c12836068-12835800_rcn1_198                      GCGTCGTTTATTGTTTCAGATT--TTTCAATATGGAAATGGCCCTGA-TGACAGACGTAAT
Gasterosteus-aculeatus_BROADS1_groupXIX-1308516-1308623_ENSGACG00000002487_79           -------------------------------------------------------------
Tetraodon-nigroviridis_TETRAODON8_5-4275384-4275614_rcn1_180                            GCGTCCTTTATTGTTTCCGATT--TTTCAGTAGGGGAATGGCCCCGG-TGACAGACGTAAT
Tetraodon-nigroviridis_TETRAODON8_Unrandom-21877115-21877223_ENSTNIG00000004771_100     -------------------------------------------------------------
Oryzias-latipes_ASM223467v1_3-c23329716-23329447_ENSORLG00000009881_227                 GCGTCGTTTATTGTTTCAAATT--TTTCAATATGGAAATGGCCCCGG-TGACAGACGTAAT
Latimeria-chalumnae_LatCha1_JH126652.1-1371187-1371811_rcn1_766                         ACATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATGGTCCCTG-TGACAGAAGTAAT
Microcaecilia-unicolor-N_aMicUni1-1_NC044034.1-c140723304-140722684_NONE_667            CTATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATAGTTCCTG-TGACAGAAGTAAT
Xenopus-tropicalis_v91_4-c9759110-9758467_fgf11_421                                     CCTCCGTTTATTGTTTCAGATT--TTTCAATTTGGAAATAGTCTCGC-TGACAGAAGTAAT
Sphenodon-punctatus_ASM311381v1_QEPC01008061.1-c692228-691608_ENSSPUG00000004587_914    CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATAGTCCCTG-TGACAGAAGTAAT
Podarcis-muralis-N_PodMur10_NC041312.1-66434474-66435094_NONE_910                       CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATAGTCCCTG-TGACAGAAGTAAT
Anolis-carolinensis_0_1-60922543-60923163_ENSACAG00000002439_887                        CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATAGTCCCTG-TGACAGAAGTAAT
Python-bivittatus-N_502_NW006532569.1-c68387-67767_NONE_869                             CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATAGCCCCTG-TGACAGAAGTAAT
Protobothrops-mucrosquamatus-N_1-0_NW015388637.1-31923-32543_NONE_860                   CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATAGCCCCTG-TGACAGAAGTAAT
Thamnophis-sirtalis-N_6-0_NW013657925.1-491476-492100_NONE_844                          CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATAGCCCCTG-TGACAGAAGTAAT
Pseudonaja-textilis-N_EBS10Xv2-PRI_NW020769309.1-c4502074-4501454_NONE_860              CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATAGCCCCTG-TGACAGAAGTAAT
Notechis-scutatus_TS10Xv2-PRI_ULFQ01000010.1-15461846-15462466_ENSNSUG00000012105_856   CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATAGCCCCTG-TGACAGAAGTAAT
Chelonoidis-abingdonii_ASM359739v1_PKMU01004445.1-651872-652492_ENSCABG00000012666_928  CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATAGTCCCTG-TGACAGAAGTAAT
Alligator-mississippiensis-N_ASM28112v4_NW017713697.1-28608132-28608752_NONE_919        CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATAGTCCCTG-TGACAGAAGTAAT
Nothoprocta-perdicaria_notPer1_PTEW01000029.1-c3233217-3232597_ENSNPEG00000007456_928   CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATAGTCCCTG-TGACAGAAGTAAT
Gallus-gallus_GRCg6a_5-5545349-5545969_ENSGALG00000012121_919                           CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATAGTCTCTG-TGACAGAAGTAAT
Calidris-pugnax_ASM143184v1_KQ482227.1-1593784-1594404_ENSCPUG00000017141_919           CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATAGTCCCTG-TGACAGAAGTAAT
Ornithorhynchus-anatinus_OANA5_3-18033675-18034294_ENSOANG00000015148_872               CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATAGTCCCTG-TGACAGAAGTAAT
Ornithorhynchus-anatinus_OANA5_Ultra43-c272924-272857_NKD2_54                           -------------------------------------------------------------
Monodelphis-domestica_monDom5_5-267742398-267743017_ENSMODG00000009625_895              CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATAGTCCCCG-TGACAGAAGTAAT
Choloepus-hoffmanni_choHof1_scaffold23039-c3496-2877_NONE_1006                          CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATACTCCCCA-TGACAGAAGTAAT
Chrysochloris-asiatica-N_ChrAsi1-0_NW006408590.1-7597970-7598590_NONE_1027              CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATACTCCCCG-TGACAGAAGTAAT
Condylura-cristata-N_ConCri1-0_NW004567116.1-c18302962-18302345_NONE_1019               CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATACTCCCCG-TGACAGAAGTAAT
Myotis-lucifugus_0_GL429859-3839511-3840129_ENSMLUG00000009140_1031                     CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATACTCCCCA-TGACAGAAGTAAT
Equus-caballus_0_7-99998407-99999021_RCN1_956                                           CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATACTCCCTG-TGACAGAAGTAAT
Bos-taurus_2_15-62788984-62789604_RCN1_974                                              CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATACTCCCCG-TGACAGAAGTAAT
Heterocephalus-glaber-male_0_JH173915.1-848248-848867_ENSHGLG00100011830_1011           CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATACTCCCCG-TGACAGAAGTAAT
Nannospalax-galili_0_KL199188.1-5296444-5297060_Rcn1_1006                               CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATACTCCCTG-TGACAGAAGTAAT
Mus-musculus_GRCm38_2-c105448179-105447561_Rcn1_1031                                    CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATACTCCCTG-TGACAGAAGTAAT
Propithecus-coquereli_0_KQ022625.1-c4941625-4941006_ENSPCOG00000015851_1042             CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATACTCCCCG-TGACAGAAGTAAT
Aotus-nancymaae_0_KZ197012.1-7301836-7302455_ENSANAG00000027955_1083                    CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATACTCCCTG-TGACAGAAGTAAT
Homo-sapiens_GRCh38_11-32031078-32031697_RCN1_1119                                      CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATACTTCCCG-TGACAGAAGTAAT
YOURSEQ1_agCNE2_Homo-sapiens-hg19_GRCh37_11-32052624-32053243                           CCATCATTTATTGTTTCAGATT--TTTCAATTTGAAAATACTTCCCG-TGACAGAAGTAAT


################ Settings ################

Taxon sampling:
Callorhinchus-milii_Black
Rhincodon-typus-N_Black
Erpetoichthys-calabaricus_Green
Lepisosteus-oculatus_Green
Danio-rerio_Green
Gasterosteus-aculeatus_Green
Tetraodon-nigroviridis_Green
Oryzias-latipes_Green
Latimeria-chalumnae_Purple
Microcaecilia-unicolor-N_Purple
Xenopus-tropicalis_Purple
Sphenodon-punctatus_Orange
Podarcis-muralis-N_Orange
Anolis-carolinensis_Orange
Python-bivittatus-N_Orange
Protobothrops-mucrosquamatus-N_Orange
Thamnophis-sirtalis-N_Orange
Pseudonaja-textilis-N_Orange
Notechis-scutatus_Orange
Chelonoidis-abingdonii_Magenta
Alligator-mississippiensis-N_Magenta
Nothoprocta-perdicaria_Magenta
Gallus-gallus_Magenta
Calidris-pugnax_Magenta
Ornithorhynchus-anatinus_Blue
Monodelphis-domestica_Blue
Choloepus-hoffmanni_Blue
Chrysochloris-asiatica-N_Red
Condylura-cristata-N_Red
Myotis-lucifugus_Blue
Equus-caballus_Blue
Bos-taurus_Blue
Heterocephalus-glaber-male_Red
Nannospalax-galili_Red
Mus-musculus_Blue
Propithecus-coquereli_Blue
Aotus-nancymaae_Blue
Homo-sapiens_Blue

>blastn_task
blastn

>blastn_word_size
11

>blastn_E-value_threshold_for_reported_sequences
1e-3

>Number_of_hits_to_report_per_genome
2

Color pattern:
Vertebrata

>TreeSearchMethod
Neighbor-joining method (Saitou and Nei 1986)

>SubstitutionModel
TN93 (Tamura and Nei 1993) + gamma

>Dependencies
BLAST 2.7.1+
MAFFT v7.356b
trimAl 1.2rev59
ape in R, Version: 5.0

Analysis time: 51.3 seconds

Database:
Callorhinchus-milii_             :Callorhinchus_milii.Callorhinchus_milii-6.1.3.dna_rm.toplevel.fa
Rhincodon-typus-N_               :Rhincodon-typus-N_GCF_001642345.1_ASM164234.v2.dna_nb.genomic.fna
Erpetoichthys-calabaricus_       :Erpetoichthys_calabaricus.fErpCal1.1.dna_rm.toplevel.fa
Lepisosteus-oculatus_            :Lepisosteus_oculatus.LepOcu1.dna_rm.toplevel.fa
Danio-rerio_                     :Danio_rerio.GRCz11.dna_rm.primary_assembly.fa
Gasterosteus-aculeatus_          :Gasterosteus_aculeatus.BROADS1.dna_rm.toplevel.fa
Tetraodon-nigroviridis_          :Tetraodon_nigroviridis.TETRAODON8.dna_rm.toplevel.fa
Oryzias-latipes_                 :Oryzias_latipes.ASM223467v1.dna_rm.toplevel.fa
Latimeria-chalumnae_             :Latimeria_chalumnae.LatCha1.dna_rm.toplevel.fa
Microcaecilia-unicolor-N_        :Microcaecilia-unicolor-N.GCF_901765095-1.aMicUni1-1.dna_nb.genomic.fna
Xenopus-tropicalis_              :Xenopus-tropicalis.v91.dna_rm.toplevel.fa
Sphenodon-punctatus_             :Sphenodon_punctatus.ASM311381v1.dna_rm.toplevel.fa
Podarcis-muralis-N_              :Podarcis-muralis-N.GCF_004329235-1.PodMur10.dna_nb.genomic.fna
Anolis-carolinensis_             :Anolis_carolinensis.AnoCar2.0.dna_rm.toplevel.fa
Python-bivittatus-N_             :Python-molurus-bivittatus-N.GCF_000186305-1_.502.dna_nb.genomic.fna
Protobothrops-mucrosquamatus-N_  :Protobothrops-mucrosquamatus-N.GCF_001527695-2.1-0.dna_nb.genomic.fna
Thamnophis-sirtalis-N_           :Thamnophis-sirtalis-N.GCF_001077635-1.6-0.dna_nb.genomic.fna
Pseudonaja-textilis-N_           :Pseudonaja-textilis-N.GCF_900518735-1.EBS10Xv2-PRI.dna_nb.genomic.fna
Notechis-scutatus_               :Notechis_scutatus.TS10Xv2-PRI.dna_rm.toplevel.fa
Chelonoidis-abingdonii_          :Chelonoidis_abingdonii.ASM359739v1.dna_rm.toplevel.fa
Alligator-mississippiensis-N_    :Alligator-mississippiensis-N.GCF_000281125-3.ASM28112v4.dna_nb.genomic.fna
Nothoprocta-perdicaria_          :Nothoprocta_perdicaria.notPer1.dna_rm.toplevel.fa
Gallus-gallus_                   :Gallus_gallus.GRCg6a.dna_rm.toplevel.fa
Calidris-pugnax_                 :Calidris_pugnax.ASM143184v1.dna_rm.toplevel.fa
Ornithorhynchus-anatinus_        :Ornithorhynchus_anatinus.OANA5.dna_rm.toplevel.fa
Monodelphis-domestica_           :Monodelphis_domestica.monDom5.dna_rm.toplevel.fa
Choloepus-hoffmanni_             :Choloepus_hoffmanni.choHof1.dna_rm.toplevel.fa
Chrysochloris-asiatica-N_        :Chrysochloris-asiatica-N.GCF_000296735-1.ChrAsi1-0.dna_nb.genomic.fna
Condylura-cristata-N_            :Condylura-cristata-N.GCF_000260355-1.ConCri1-0.dna_nb.genomic.fna
Myotis-lucifugus_                :Myotis_lucifugus.Myoluc2.0.dna_rm.toplevel.fa
Equus-caballus_                  :Equus_caballus.EquCab3.0.dna_rm.toplevel.fa
Bos-taurus_                      :Bos_taurus.ARS-UCD1.2.dna_rm.toplevel.fa
Heterocephalus-glaber-male_      :Heterocephalus_glaber_male.HetGla_1.0.dna_rm.toplevel.fa
Nannospalax-galili_              :Nannospalax_galili.S.galili_v1.0.dna_rm.toplevel.fa
Mus-musculus_                    :Mus_musculus.GRCm38.dna_rm.primary_assembly.fa
Propithecus-coquereli_           :Propithecus_coquereli.Pcoq_1.0.dna_rm.toplevel.fa
Aotus-nancymaae_                 :Aotus_nancymaae.Anan_2.0.dna_rm.toplevel.fa
Homo-sapiens_                    :Homo_sapiens.GRCh38.dna_rm.primary_assembly.fa