Ocean eDNA Map
Instruction A Web Tool/Database for Metabarcodes in the Northwestern Pacific and Beyond GitHub
 
 
Status    
Ready.
   
Search species
    or enter keywords
    or upload species/ASV list   Example
Site name on map
ASV comparison criteria
Distance method for composition comparison
PDF file
 
Species/ASV table
Upload excel file  
Example file .xlsx OTU_Closek19_Ex.xlsx (link),
ASV_KH20-9_KH22-5_Ex.xlsx,
ASV_KH22-5_Ex.xlsx,
ASV_KH20-9_Ex.xlsx,
  .csv species_TEST.csv,
  .txt List_Miya15Kuroshio.txt (link)
   and/or choose from the following:
 Sea area Habitat Organism Metabarcoding loci Table Cruise Article
 
Japan Archipelago
   Boso Pen. Coast Fish mt12S Species.xlsx — Miya22
 
Kuroshio Current
   Extension Ocean Fish mt12S OTU.xlsx:1, 2 KS18-05 Yu22
   Axis Ocean Fish mt12S ASV.xlsx KH20-09 Inoue,sub.
  Ocean Dinoflagellate 18S V4 Species.xlsx KH20-09 Wu24
   Tokara Str. Ocean Fish mt12S ASV.xlsx KH22-5 Inoue,sub.
 
Okinawa
   Okinawa Is. Reef Coral mt12S Genus.xlsx — Nishitsuji23
   Bise Reef Coral mt12S Genus.xlsx — Shinzato21
  Reef Fish mt12S Species.xlsx — Oka20
 
Tsushima Current
   Korea Str.
  Ocean Fish mt12S Species.xlsx — Kim22
 
NW pacific and Chukchi Sea
  Ocean Fish mt12S Species.xlsx — Kawakami23
 
North Sea
   Belgian side Coast Fish mt12S Species.xlsx — Dukan24
 
Central Pacific
   Palmyra Atoll Reef Fish 18S,mt12S,CO1 OTU.xlsx — Lafferty20
 
Timor Sea
   Browse Island Reef Fish mt16S Species.xlsx — Bessey20
 
Eastern Pacific
   Monterey Bay Coast Fish mt12S Species.xlsx — Closek19
13 Apr. 2025 jinoueATg.ecc.u-tokyo.ac.jp ver.1.0.0