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phyloBARCODER v.1.1.11
SILVA LSU 138.2 Ref NR99 · Gene: LSU · Classification: Dacrymycetes
1 records · 2,056 bases
SILVA LSU 138.2; all biological domains retained (Eukaryota, Bacteria and Archaea). Parc includes partial sequences; Ref NR99 is a length/quality-filtered, redundancy-reduced subset. The same 27 published eDNA OTUs are used for comparison. No example accessions are removed from SILVA; matches are not independent validation. Taxonomy follows SILVA; absent display ranks are unclassified. SILVA lineage and submitted organism names can disagree; inspect accession records before interpreting identification. NJ trees are not reproductions of the source paper’s RAxML analysis.
Data sources and reuse information
FASTA · Taxonomy table · Download ZIP · Search settings
All matching reference records are included. Sequences cover the selected marker; lengths vary. Boundary status is reported in the taxonomy table. No BLAST search or identity calculation is performed.
New extraction · Tree Identification (Fungi)
>FJ644516.1.2056 LSU Eukaryota;Fungi;Basidiomycota;Agaricomycotina;Dacrymycetes;Dacrymycetales;Dacrymycetaceae;Dacrymyces;Dacrymyces stillatus CCCTAGTAACTGCGAGTGAAGCGGGACAAGCTCAAATTTAAAAGCCTTCGGGCGTTGTAATCTATAGAAGTGTTTTCGGT CGTTGCCTCGGATAAGTCTCTTGGAACAGAGTGTCAAAGAGGGTGAGAATCCCGTTCTTGCCGAGCTACCAACGTCCTTG CGATACACTTTCAAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAACGGGTGGTAAACTCCATCTAAAGCTAAATATTGG CGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATT GTTAAAAGGGAAACGCTTGGAGTCAGTCGCGTTGCATGGACTCAGCCTCACGGTGTATTTCTATGCAACGGGTCAACATC AGTTTTGGGCGGGGGAAAAGGGCTTGGGGAATGTAGCAACCTCGGTTGTGTTATAGCCCCTTGTCGTACACCTCGCCCGG GACTGAGGTCTGCTTAAAGGATGTTGACGAAATGGCTCTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATG TCTGCGAGTGTTTGGGTGCTAAACCCATGCGCGCAATGAAAGTAATACAGGTGGGAGGCCTCGGCCGCACCATCGACCGA TCCGGATCTCTTGGGATGGATTTGAGTAAGAGCATATATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCG AAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGAAA GACTAATCGAACCATCTAGTAGCTGGTTCCTGCCGAAGTTTCCCTCAGGATAGCAGAAGCTCGTATCAGTTTTATGAGGT AAAGCGAATGATTAGAGGCCTTGGGGTTGAAACAACCTTAACCTATTCTCAAACTTTAAATATGTAAGAAGTCCCTGTCA CTTGATTGGACTTGGACCTTCGAATGAGAGCTTCTAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACC GATCGCGGGGTTAAGGTGCCGGAATACACGCTCATCAGACACCACAAAAGGTGTTAGTTCATCTAGACAGCAGGACGGTG GCCATGGAAGTCGGAACCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATGAACTAGCCCTGAAAATGGATGGCGCTC AAGCGTGTTACCCATACCCCGCCGTCAACGTTGAAGTGACGCGTTGACGAGTAGGCAGGCGTGGGGGTTTGTGAGGAAGC GTTGGCAGCGATGCCGCGTGAAACAGCCCCTAGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAGTGAGAACCTTGAAG ACTGAAGTGGAGAAAGGTTCCATGGTAACAGCAGTTGGACATGGGTTAGTCGATCCTAAGCCATAGGGAAGCTCCGTTTC AAAGTGCGCACTTGTGCGCCCATGGCGAAAGGGAAGCCGGTTAAGATTCCGGCACCAGGAGGTGGACTTTTGGCGGCAAC GCAAATGAACTTGGAGACGTCGGCGGGGGCCCCGGGAAGAGTTCTCTTTTCTCCTTAACAGCTTGTAGCCCTGAAATCAG TTTATCTGGAGCTAGGGTTAGACGGCTGCAAGAGCTCGGCACTTCTGCCGGGTCCGGTGCGTTCCCGACGGCCCTTGAAA ATCCAAGGGAACGAATAACTTTCACACCTGGTCGTACTCATAACCGCAGCAGGTCTCCTAGGTGAACAGCCTCTAGTTGA TAGAACAATGTAGACAAGGGAAGTCGGCAAAATAGATCCGTAACTTCGGGAAAAGGATTGGCTCTAAGGGTTGGGTGCAG TGGTCCTTGGATGGAAGCGAACCGGACCCGGCCGGACTAGCTCGGGCAACTGGGTCGGTCTGGCTAGGACTGGGTTGTGG AAGTCTTTGGATGCTTCGGCGTCCGCTGCACGCTTAACAACCGACTTAGAACTGGTACGGACAAGGGGAATCTGACTGTC TAATTAAAACATAGCATTGCGATGCCCGCAAATCGGCGTTGACGCAATGTGATTTC