Server: yurai (CGI)

Tree Identification (Mitochondrial genes)
Sequence Extraction (Mitochondrial genes)
Tree Identification (SSU rRNA / PR2, SILVA)
Sequence Extraction (SSU rRNA / PR2, SILVA)
Tree Identification (rbcL)
Sequence Extraction (rbcL)
Tree Identification (Fungi)
Sequence Extraction (Fungi)
BLAST Identification
Instruction
GitHub

Sequence Extraction (SSU rRNA / PR2, SILVA)

StatusReady.

Public beta testing

Validation is ongoing. Comparisons with SILVA ACT and metaPR2 could not be completed on 4 October 2026 because of service availability or connection errors. Please review the reference sequences, alignment and tree when interpreting results.

We welcome validation results and bug reports at jinoue@g.ecc.u-tokyo.ac.jp. Please include the result URL, settings and a description of the issue. New analysis results are accessible to anyone with their URL.

Keywords

Pre-installed DB

Gene

Classification or accession

Database

Reference database

phyloBARCODER v.1.1.11 · SSU sequence extraction